Information for 3-CCCCGCCC (Motif 11)


Reverse Opposite:

p-value:1e-8
log p-value:-2.064e+01
Information Content per bp:1.530
Number of Target Sequences with motif113.0
Percentage of Target Sequences with motif49.56%
Number of Background Sequences with motif13907.1
Percentage of Background Sequences with motif30.37%
Average Position of motif in Targets1658.8 +/- 434.3bp
Average Position of motif in Background1004.4 +/- 639.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)2.26
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0039.1_Klf7_1/Jaspar

Match Rank:1
Score:0.92
Offset:-4
Orientation:forward strand
Alignment:----CCCCGCCC----
TCGACCCCGCCCCTAT

MA0599.1_KLF5/Jaspar

Match Rank:2
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-CCCCGCCC-
GCCCCGCCCC

MA0079.3_SP1/Jaspar

Match Rank:3
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-CCCCGCCC--
GCCCCGCCCCC

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:CCCCGCCC
CCCCCCCC

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.88
Offset:-2
Orientation:forward strand
Alignment:--CCCCGCCC--
GGCCCCGCCCCC

MA0039.2_Klf4/Jaspar

Match Rank:6
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-CCCCGCCC-
GCCCCACCCA

POL003.1_GC-box/Jaspar

Match Rank:7
Score:0.87
Offset:-3
Orientation:reverse strand
Alignment:---CCCCGCCC---
NAGCCCCGCCCCCN

PB0107.1_Ascl2_2/Jaspar

Match Rank:8
Score:0.86
Offset:-4
Orientation:forward strand
Alignment:----CCCCGCCC----
CTATCCCCGCCCTATT

MA0516.1_SP2/Jaspar

Match Rank:9
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-CCCCGCCC------
GCCCCGCCCCCTCCC

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-CCCCGCCC-
GCCMCRCCCH