Information for 7-CGGCCGGATC (Motif 15)


Reverse Opposite:

p-value:1e-8
log p-value:-1.896e+01
Information Content per bp:1.809
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif17.11%
Number of Background Sequences with motif2793.4
Percentage of Background Sequences with motif6.10%
Average Position of motif in Targets1289.1 +/- 487.1bp
Average Position of motif in Background1051.4 +/- 673.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CGGCCGGATC--
--RCCGGAARYN

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CGGCCGGATC-
-ANCAGGATGT

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CGGCCGGATC
----CGGAGC

POL011.1_XCPE1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CGGCCGGATC
GGGCGGGACC

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CGGCCGGATC--
--DCCGGAARYN

PB0077.1_Spdef_1/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CGGCCGGATC---
GTACATCCGGATTTTT

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CGGCCGGATC--
--RCCGGAAGTD

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CGGCCGGATC-
-GGCGGGAARN

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CGGCCGGATC
CWGGCGGGAA-

MA0470.1_E2F4/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CGGCCGGATC-
GGGCGGGAAGG