Information for 4-TTCGGAAC (Motif 18)


Reverse Opposite:

p-value:1e-7
log p-value:-1.652e+01
Information Content per bp:1.720
Number of Target Sequences with motif84.0
Percentage of Target Sequences with motif36.84%
Number of Background Sequences with motif9782.8
Percentage of Background Sequences with motif21.36%
Average Position of motif in Targets1016.0 +/- 547.2bp
Average Position of motif in Background994.4 +/- 663.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0115.1_Ehf_2/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TTCGGAAC-----
AAGATCGGAANTNNNA

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTCGGAAC-
CSTGGGAAAD

PB0034.1_Irf4_1/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TTCGGAAC----
CGTATCGAAACCAAA

PB0162.1_Sfpi1_2/Jaspar

Match Rank:4
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TTCGGAAC-
CAAATTCCGGAACC

PB0194.1_Zbtb12_2/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TTCGGAAC---
TATCATTAGAACGCT

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TTCGGAAC--
SCCTAGCAACAG

PB0055.1_Rfx4_1/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TTCGGAAC---
TACCATAGCAACGGT

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TTCGGAAC-----
-----AACCGANA

PB0054.1_Rfx3_1/Jaspar

Match Rank:9
Score:0.55
Offset:-8
Orientation:forward strand
Alignment:--------TTCGGAAC-------
TGTGACCCTTAGCAACCGATTAA

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TTCGGAAC---
CCGCATAGCAACGGA