Information for 10-TCAGCTGTAAAA (Motif 20)


Reverse Opposite:

p-value:1e-6
log p-value:-1.514e+01
Information Content per bp:1.874
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif8.77%
Number of Background Sequences with motif1020.0
Percentage of Background Sequences with motif2.23%
Average Position of motif in Targets886.4 +/- 571.5bp
Average Position of motif in Background999.1 +/- 612.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0170.1_Tgif2/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TCAGCTGTAAAA--
AACTAGCTGTCAATAC

PH0102.1_Meis1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TCAGCTGTAAAA--
AACGAGCTGTCAATAC

PH0104.1_Meis2/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TCAGCTGTAAAA--
AAAGACCTGTCAATAC

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TCAGCTGTAAAA
NAHCAGCTGD----

PH0169.1_Tgif1/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TCAGCTGTAAAA---
NNNCAGCTGTCAATATN

PH0157.1_Rhox11_1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TCAGCTGTAAAA---
AAGACGCTGTAAAGCGA

PH0158.1_Rhox11_2/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TCAGCTGTAAAA---
AGGACGCTGTAAAGGGA

PH0105.1_Meis3/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TCAGCTGTAAAA--
AATTACCTGTCAATAC

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:9
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TCAGCTGTAAAA
-CAGCTGTT---

PH0140.1_Pknox1/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TCAGCTGTAAAA--
AAAGACCTGTCAATCC