Information for 12-GGAAATCAGC (Motif 22)


Reverse Opposite:

p-value:1e-6
log p-value:-1.404e+01
Information Content per bp:1.826
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif13.60%
Number of Background Sequences with motif2343.0
Percentage of Background Sequences with motif5.12%
Average Position of motif in Targets961.0 +/- 515.8bp
Average Position of motif in Background982.9 +/- 635.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----GGAAATCAGC---
AAGGCGAAATCATCGCA

MA0156.1_FEV/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GGAAATCAGC
CAGGAAAT----

PB0012.1_Elf3_1/Jaspar

Match Rank:3
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----GGAAATCAGC
AACAAGGAAGTAA--

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GGAAATCAGC
NACAGGAAAT----

MA0038.1_Gfi1/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GGAAATCAGC-
-CAAATCACTG

MA0117.1_Mafb/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GGAAATCAGC
--NCGTCAGC

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GGAAATCAGC
-GTAAACAG-

MA0480.1_Foxo1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGAAATCAGC-
TGTAAACAGGA

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GGAAATCAGC
NACAGGAAAT----

MA0152.1_NFATC2/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGAAATCAGC
TGGAAAA----