Information for 13-CAGCAAGCGC (Motif 24)


Reverse Opposite:

p-value:1e-5
log p-value:-1.255e+01
Information Content per bp:1.749
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif22.81%
Number of Background Sequences with motif5488.0
Percentage of Background Sequences with motif11.98%
Average Position of motif in Targets1306.0 +/- 553.6bp
Average Position of motif in Background1026.1 +/- 664.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.28
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0506.1_NRF1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CAGCAAGCGC-
GCGCCTGCGCA

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CAGCAAGCGC--
GCGCATGCGCAG

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CAGCAAGCGC
---CACGCA-

NRF(NRF)/Promoter/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CAGCAAGCGC--
GCGCATGCGCAC

PB0151.1_Myf6_2/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CAGCAAGCGC---
AGCAACAGCCGCACC

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CAGCAAGCGC
CAGCC-----

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CAGCAAGCGC
CCACACAGCAGGAGA

PB0130.1_Gm397_2/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CAGCAAGCGC----
AGCGGCACACACGCAA

PB0039.1_Klf7_1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CAGCAAGCGC----
TCGACCCCGCCCCTAT

PB0095.1_Zfp161_1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CAGCAAGCGC------
TGGCGCGCGCGCCTGA