| p-value: | 1e-3 |
| log p-value: | -9.059e+00 |
| Information Content per bp: | 1.800 |
| Number of Target Sequences with motif | 96.0 |
| Percentage of Target Sequences with motif | 42.11% |
| Number of Background Sequences with motif | 13910.7 |
| Percentage of Background Sequences with motif | 30.37% |
| Average Position of motif in Targets | 564.9 +/- 527.7bp |
| Average Position of motif in Background | 980.6 +/- 604.5bp |
| Strand Bias (log2 ratio + to - strand density) | 0.7 |
| Multiplicity (# of sites on avg that occur together) | 1.56 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
PB0170.1_Sox17_2/Jaspar
| Match Rank: | 1 |
| Score: | 0.71
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --TGTATGTATG-----
NTTNTATGAATGTGNNC |
|
|
|
PB0028.1_Hbp1_1/Jaspar
| Match Rank: | 2 |
| Score: | 0.68
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----TGTATGTATG--
ACTATGAATGAATGAT |
|
|
|
PB0130.1_Gm397_2/Jaspar
| Match Rank: | 3 |
| Score: | 0.62
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -TGTATGTATG-----
NNGCGTGTGTGCNGCN |
|
|
|
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
| Match Rank: | 4 |
| Score: | 0.61
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----TGTATGTATG-
GTCATGCHTGRCTGS |
|
|
|
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 5 |
| Score: | 0.59
| | Offset: | 1
| | Orientation: | forward strand |
| Alignment: | TGTATGTATG-
-VBSYGTCTGG |
|
|
|
PB0178.1_Sox8_2/Jaspar
| Match Rank: | 6 |
| Score: | 0.58
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---TGTATGTATG-
NNTNTCATGAATGT |
|
|
|
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer
| Match Rank: | 7 |
| Score: | 0.57
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----TGTATGTATG-
CCATTGTATGCAAAT |
|
|
|
MA0006.1_Arnt::Ahr/Jaspar
| Match Rank: | 8 |
| Score: | 0.57
| | Offset: | 4
| | Orientation: | forward strand |
| Alignment: | TGTATGTATG
----TGCGTG |
|
|
|
PB0060.1_Smad3_1/Jaspar
| Match Rank: | 9 |
| Score: | 0.57
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -TGTATGTATG------
NNTNNTGTCTGGNNTNG |
|
|
|
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer
| Match Rank: | 10 |
| Score: | 0.56
| | Offset: | 3
| | Orientation: | reverse strand |
| Alignment: | TGTATGTATG---
---TTGCGTGCVA |
|
|
|
