Information for 16-GTGGCCCGGGGT (Motif 27)


Reverse Opposite:

p-value:1e-3
log p-value:-7.717e+00
Information Content per bp:1.971
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif29.2
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets1237.0 +/- 569.8bp
Average Position of motif in Background964.3 +/- 747.2bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)2.33
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0153.1_Nr2f2_2/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GTGGCCCGGGGT-
NNNNTGACCCGGCGCG

MA0524.1_TFAP2C/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GTGGCCCGGGGT----
-TGCCCTGGGGCNANN

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTGGCCCGGGGT--
NTGCCCANNGGTNA

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTGGCCCGGGGT
WTGSCCTSAGGS

MA0003.2_TFAP2A/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTGGCCCGGGGT----
-TGCCCTGAGGCANTN

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GTGGCCCGGGGT
ATGCCCTGAGGC

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GTGGCCCGGGGT
--GGCGCGCT--

MA0510.1_RFX5/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GTGGCCCGGGGT
NCTGTTGCCAGGGAG

PB0164.1_Smad3_2/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GTGGCCCGGGGT-
NAGANTGGCGGGGNGNA

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GTGGCCCGGGGT
-AGGCCTAG---