Information for 19-TCCGGACCGAAC (Motif 29)


Reverse Opposite:

p-value:1e-2
log p-value:-6.421e+00
Information Content per bp:1.944
Number of Target Sequences with motif154.0
Percentage of Target Sequences with motif67.54%
Number of Background Sequences with motif26479.0
Percentage of Background Sequences with motif57.82%
Average Position of motif in Targets1177.4 +/- 543.2bp
Average Position of motif in Background1018.9 +/- 661.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL001.1_MTE/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TCCGGACCGAAC------
TTTCGAGCGGAACGGTCGC

MA0028.1_ELK1/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TCCGGACCGAAC
CTTCCGGNNN----

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----TCCGGACCGAAC
NRYTTCCGGY------

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----TCCGGACCGAAC
HACTTCCGGY------

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----TCCGGACCGAAC
NRYTTCCGGH------

PB0034.1_Irf4_1/Jaspar

Match Rank:6
Score:0.50
Offset:2
Orientation:forward strand
Alignment:TCCGGACCGAAC-----
--CGTATCGAAACCAAA

PB0202.1_Zfp410_2/Jaspar

Match Rank:7
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----TCCGGACCGAAC-
TCACCCCGCCCCAAATT

MF0001.1_ETS_class/Jaspar

Match Rank:8
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--TCCGGACCGAAC
CTTCCGGT------

MA0062.2_GABPA/Jaspar

Match Rank:9
Score:0.49
Offset:-6
Orientation:reverse strand
Alignment:------TCCGGACCGAAC
NCCACTTCCGG-------

PB0035.1_Irf5_1/Jaspar

Match Rank:10
Score:0.48
Offset:1
Orientation:forward strand
Alignment:TCCGGACCGAAC----
-ATAAACCGAAACCAA