Information for 1-TTTACTGACC (Motif 3)


Reverse Opposite:

p-value:1e-11
log p-value:-2.744e+01
Information Content per bp:1.830
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif18.86%
Number of Background Sequences with motif2501.5
Percentage of Background Sequences with motif5.46%
Average Position of motif in Targets980.7 +/- 509.5bp
Average Position of motif in Background981.4 +/- 648.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0073.1_Hoxc9/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TTTACTGACC---
NNAATTAATGACCNNN

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TTTACTGACC
ATTTCCTGTN-

PB0041.1_Mafb_1/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TTTACTGACC----
AAATTTGCTGACTTAGA

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:TTTACTGACC-
-----TGACCT

PH0012.1_Cdx1/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTTACTGACC---
NAATTTTATTACCTNN

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTTACTGACC
TGTTTACTTT--

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTTACTGACC
ATTTCCTGTN-

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTTACTGACC
TGTTTACTTT--

MA0496.1_MAFK/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTTACTGACC---
AAANTGCTGACTNAG

MA0032.1_FOXC1/Jaspar

Match Rank:10
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TTTACTGACC
--TACTNNNN