Information for 6-CCTCCTCAGGGC (Motif 9)


Reverse Opposite:

p-value:1e-9
log p-value:-2.089e+01
Information Content per bp:1.851
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif11.84%
Number of Background Sequences with motif1326.0
Percentage of Background Sequences with motif2.90%
Average Position of motif in Targets1166.4 +/- 583.9bp
Average Position of motif in Background1036.6 +/- 618.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CCTCCTCAGGGC--
--GCCTCAGGGCAT

MA0003.2_TFAP2A/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CCTCCTCAGGGC-
CATTGCCTCAGGGCA

MA0524.1_TFAP2C/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CCTCCTCAGGGC-
CATGGCCCCAGGGCA

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CCTCCTCAGGGC--
--SCCTSAGGSCAW

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCTCCTCAGGGC--
TCACCTCTGGGCAG

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CCTCCTCAGGGC--
--TCCCCTGGGGAC

MA0154.2_EBF1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCTCCTCAGGGC
-GTCCCCAGGGA

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCTCCTCAGGGC--
TTGCCCTAGGGCAT

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCTCCTCAGGGC--
NTCGCCTCAGGCAAT

MA0598.1_EHF/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCTCCTCAGGGC
CCTTCCTG-----