Information for 1-AAAAAAAAAA (Motif 1)


Reverse Opposite:

p-value:1e-17
log p-value:-4.021e+01
Information Content per bp:1.530
Number of Target Sequences with motif1230.0
Percentage of Target Sequences with motif18.83%
Number of Background Sequences with motif6489.7
Percentage of Background Sequences with motif14.90%
Average Position of motif in Targets197.9 +/- 100.9bp
Average Position of motif in Background202.0 +/- 116.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.89
Offset:-4
Orientation:forward strand
Alignment:----AAAAAAAAAA---
GTTAAAAAAAAAAATTA

PB0116.1_Elf3_2/Jaspar

Match Rank:2
Score:0.82
Offset:-4
Orientation:forward strand
Alignment:----AAAAAAAAAA---
GTTCAAAAAAAAAATTC

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.78
Offset:-5
Orientation:forward strand
Alignment:-----AAAAAAAAAA
TACTGGAAAAAAAA-

PB0093.1_Zfp105_1/Jaspar

Match Rank:4
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---AAAAAAAAAA--
AACAAACAACAAGAG

PB0186.1_Tcf3_2/Jaspar

Match Rank:5
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----AAAAAAAAAA
AGCCGAAAAAAAAAT

MA0041.1_Foxd3/Jaspar

Match Rank:6
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AAAAAAAAAA--
AAACAAACATTC

PB0148.1_Mtf1_2/Jaspar

Match Rank:7
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----AAAAAAAAAA
AAATAAGAAAAAAC

PB0123.1_Foxl1_2/Jaspar

Match Rank:8
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----AAAAAAAAAA-
ATATCAAAACAAAACA

MA0042.1_FOXI1/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AAAAAAAAAA--
AAACAAACANNC

PB0119.1_Foxa2_2/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AAAAAAAAAA---
AAAAATAACAAACGG