Information for 7-CTGGAGCAGCAC (Motif 10)


Reverse Opposite:

p-value:1e-8
log p-value:-1.973e+01
Information Content per bp:1.916
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif0.21%
Number of Background Sequences with motif11.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets213.4 +/- 117.8bp
Average Position of motif in Background254.6 +/- 93.6bp
Strand Bias (log2 ratio + to - strand density)3.7
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTGGAGCAGCAC
-GGGAGGACNG-

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTGGAGCAGCAC
CCAGGAACAG---

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTGGAGCAGCAC
-CGGAGC-----

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTGGAGCAGCAC
GCTGASTCAGCA-

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTGGAGCAGCAC
-TGAGTCAGCA-

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CTGGAGCAGCAC
------CAGCC-

MA0591.1_Bach1::Mafk/Jaspar

Match Rank:7
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CTGGAGCAGCAC
AGGATGACTCAGCAC

MA0496.1_MAFK/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CTGGAGCAGCAC---
CTGAGTCAGCAATTT

MA0495.1_MAFF/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CTGGAGCAGCAC-----
GCTGAGTCAGCAATTTTT

MA0152.1_NFATC2/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CTGGAGCAGCAC
-TGGAAAA----