Information for 8-GGGCCCCSGGCC (Motif 11)


Reverse Opposite:

p-value:1e-8
log p-value:-1.893e+01
Information Content per bp:1.643
Number of Target Sequences with motif131.0
Percentage of Target Sequences with motif2.01%
Number of Background Sequences with motif508.1
Percentage of Background Sequences with motif1.17%
Average Position of motif in Targets191.9 +/- 107.4bp
Average Position of motif in Background195.7 +/- 103.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0524.1_TFAP2C/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GGGCCCCSGGCC-
CATGGCCCCAGGGCA

MA0003.2_TFAP2A/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GGGCCCCSGGCC-
CATTGCCTCAGGGCA

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GGGCCCCSGGCC--
--GCCTCAGGGCAT

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:4
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GGGCCCCSGGCC--
--SCCTSAGGSCAW

MA0146.2_Zfx/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GGGCCCCSGGCC--
GGGGCCGAGGCCTG

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGGCCCCSGGCC--
TTGCCCTAGGGCAT

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGGCCCCSGGCC--
CCGCCCAAGGGCAG

PB0052.1_Plagl1_1/Jaspar

Match Rank:8
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GGGCCCCSGGCC
TTGGGGGCGCCCCTAG-

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGGCCCCSGGCC
GTCCCCAGGGGA

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:10
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:GGGCCCCSGGCC-
-----CTAGGCCT