Information for 5-TAGYACAT (Motif 15)


Reverse Opposite:

p-value:1e-7
log p-value:-1.737e+01
Information Content per bp:1.795
Number of Target Sequences with motif716.0
Percentage of Target Sequences with motif10.96%
Number of Background Sequences with motif3909.8
Percentage of Background Sequences with motif8.98%
Average Position of motif in Targets197.4 +/- 112.7bp
Average Position of motif in Background196.7 +/- 113.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0096.1_Zfp187_1/Jaspar

Match Rank:1
Score:0.79
Offset:-4
Orientation:reverse strand
Alignment:----TAGYACAT--
TTATTAGTACATAN

MA0058.2_MAX/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TAGYACAT--
AAGCACATGG

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TAGYACAT
ATTAACACCT

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:4
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TAGYACAT
KTTCACACCT

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TAGYACAT
TGACACCT

MA0147.2_Myc/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TAGYACAT--
AAGCACATGG

PH0083.1_Irx3_1/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TAGYACAT-------
ANTATTACATGTANNNN

PH0086.1_Irx5/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TAGYACAT-------
ANTNNTACATGTANNTN

PH0084.1_Irx3_2/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TAGYACAT-------
NNTATTACATGTANNNT

PB0208.1_Zscan4_2/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TAGYACAT------
CGAAGCACACAAAATA