Information for 10-AACCCCAGGCGA (Motif 16)


Reverse Opposite:

p-value:1e-7
log p-value:-1.710e+01
Information Content per bp:1.744
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif80.0
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets197.6 +/- 117.0bp
Average Position of motif in Background183.3 +/- 106.0bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.76
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AACCCCAGGCGA-
ATTGCCTGAGGCAAT

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AACCCCAGGCGA-
ATTGCCTGAGGCGAA

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AACCCCAGGCGA-
ATTCCCTGAGGGGAA

MA0524.1_TFAP2C/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AACCCCAGGCGA
CATGGCCCCAGGGCA

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AACCCCAGGCGA-
-SCCTSAGGSCAW

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AACCCCAGGCGA
NTGCCCANNGGTNA

MA0154.2_EBF1/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AACCCCAGGCGA-
--TCCCTGGGGAN

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AACCCCAGGCGA-
-GCCTCAGGGCAT

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AACCCCAGGCGA-
-TCCCCTGGGGAC

MA0002.2_RUNX1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AACCCCAGGCGA
AAACCACAGAN--