Information for 7-GGACTACA (Motif 18)


Reverse Opposite:

p-value:1e-6
log p-value:-1.498e+01
Information Content per bp:1.868
Number of Target Sequences with motif958.0
Percentage of Target Sequences with motif14.67%
Number of Background Sequences with motif5474.2
Percentage of Background Sequences with motif12.57%
Average Position of motif in Targets204.1 +/- 114.0bp
Average Position of motif in Background199.2 +/- 116.4bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GGACTACA------
--ACTACAATTCCC

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGACTACA---
NWAACCACADNN

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GGACTACA-----
AATCGCACTGCATTCCG

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GGACTACA---
NNATTGGACTTTNGNN

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGACTACA-------------
-AACTACAATTCCCAGAATGC

MA0032.1_FOXC1/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GGACTACA----
----TACTNNNN

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGACTACA---
GGGATTGCATNN

PB0203.1_Zfp691_2/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GGACTACA-----
TACGAGACTCCTCTAAC

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGACTACA
AGGCCTAG-

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGACTACA
RGGATTAR-