Information for 11-ACAGCCGATC (Motif 21)


Reverse Opposite:

p-value:1e-5
log p-value:-1.357e+01
Information Content per bp:1.918
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.12%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets227.9 +/- 77.7bp
Average Position of motif in Background237.0 +/- 112.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.88
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ACAGCCGATC
ACAGCTGTTV

PB0151.1_Myf6_2/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----ACAGCCGATC-
AGCAACAGCCGCACC

PB0047.1_Myf6_1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ACAGCCGATC---
CNGACACCTGTTCNNN

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ACAGCCGATC
HCAGCTGDTN

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ACAGCCGATC
AACAGCTG---

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ACAGCCGATC
NCAGCTGCTG

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ACAGCCGATC-
AGCAGCTGCTNN

PB0046.1_Mybl1_1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ACAGCCGATC----
TTGAAAACCGTTAATTT

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ACAGCCGATC
ACAGCTGTTN

PB0045.1_Myb_1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---ACAGCCGATC----
ATGGAAACCGTTATTTT