Information for 14-ACCATCAYCATC (Motif 24)


Reverse Opposite:

p-value:1e-5
log p-value:-1.322e+01
Information Content per bp:1.696
Number of Target Sequences with motif1888.0
Percentage of Target Sequences with motif28.91%
Number of Background Sequences with motif11474.3
Percentage of Background Sequences with motif26.35%
Average Position of motif in Targets198.5 +/- 114.1bp
Average Position of motif in Background199.2 +/- 113.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0017.1_Cux1_2/Jaspar

Match Rank:1
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----ACCATCAYCATC
TAGTGATCATCATTA--

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:2
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:ACCATCAYCATC
-YCATTAMC---

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:3
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------ACCATCAYCATC
CATAAGACCACCATTAC-

MA0027.1_En1/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ACCATCAYCATC
GANCACTACTT--

PB0079.1_Sry_1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ACCATCAYCATC---
NANTATTATAATTNNN

PB0069.1_Sox21_1/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-ACCATCAYCATC---
NNTAATTATAATNANN

PB0176.1_Sox5_2/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-ACCATCAYCATC--
TATCATAATTAAGGA

PB0064.1_Sox14_1/Jaspar

Match Rank:8
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-ACCATCAYCATC---
NNTAATTATAATTNNN

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:9
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--ACCATCAYCATC-
ADGGYAGYAGCATCT

PB0122.1_Foxk1_2/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--ACCATCAYCATC-
CAAACAACAACACCT