Information for 19-GGTATGAGTGTA (Motif 30)


Reverse Opposite:

p-value:1e-4
log p-value:-1.005e+01
Information Content per bp:1.948
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets200.2 +/- 120.5bp
Average Position of motif in Background209.7 +/- 113.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)2.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0198.1_Zfp128_2/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGTATGAGTGTA--
NNTATANATATACN

PB0170.1_Sox17_2/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GGTATGAGTGTA---
NTTNTATGAATGTGNNC

PB0178.1_Sox8_2/Jaspar

Match Rank:3
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GGTATGAGTGTA
NNTNTCATGAATGT-

MA0122.1_Nkx3-2/Jaspar

Match Rank:4
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GGTATGAGTGTA
---TTAAGTGGA

MA0462.1_BATF::JUN/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGTATGAGTGTA
GAAATGACTCA-

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GGTATGAGTGTA-
---TTGAGTGSTT

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GGTATGAGTGTA
CAGGTAAGTAT---

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GGTATGAGTGTA-
--CTTGAGTGGCT

PH0166.1_Six6_2/Jaspar

Match Rank:9
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----GGTATGAGTGTA
AATAGGGTATCAATATT

PB0059.1_Six6_1/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----GGTATGAGTGTA
AATAGGGTATCATATAT