Information for 21-GGTGAGCATC (Motif 38)


Reverse Opposite:

p-value:1e-2
log p-value:-5.266e+00
Information Content per bp:1.530
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.14%
Number of Background Sequences with motif21.6
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets223.3 +/- 122.6bp
Average Position of motif in Background185.0 +/- 120.4bp
Strand Bias (log2 ratio + to - strand density)4.8
Multiplicity (# of sites on avg that occur together)3.22
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGTGAGCATC
CAGGTAAGTAT-

MA0103.2_ZEB1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGTGAGCATC
CAGGTGAGG---

PB0029.1_Hic1_1/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GGTGAGCATC--
NGTAGGTTGGCATNNN

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGTGAGCATC
TGAGTCAGCA--

PH0017.1_Cux1_2/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGTGAGCATC----
TAGTGATCATCATTA

PB0044.1_Mtf1_1/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GGTGAGCATC--
GGGCCGTGTGCAAAAA

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGTGAGCATC
AGGTGTTAAT-

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GGTGAGCATC--
NNAGATNVNWATCTN

MA0031.1_FOXD1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GGTGAGCATC
-GTAAACAT-

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GGTGAGCATC-
-GGGAGGACNG