Information for 25-AGGAGGACAGTC (Motif 39)


Reverse Opposite:

p-value:1e-1
log p-value:-3.299e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.03%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets178.5 +/- 107.1bp
Average Position of motif in Background284.5 +/- 84.9bp
Strand Bias (log2 ratio + to - strand density)3.2
Multiplicity (# of sites on avg that occur together)5.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AGGAGGACAGTC
GGGAGGACNG--

PB0099.1_Zfp691_1/Jaspar

Match Rank:2
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AGGAGGACAGTC--
NNNNTGAGCACTGTNNG

PB0114.1_Egr1_2/Jaspar

Match Rank:3
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----AGGAGGACAGTC
TGCGGAGTGGGACTGG-

MA0160.1_NR4A2/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AGGAGGACAGTC
--AAGGTCAC--

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AGGAGGACAGTC
---AGGTCA---

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:AGGAGGACAGTC
-----CACAGN-

MA0107.1_RELA/Jaspar

Match Rank:7
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:AGGAGGACAGTC--
----GGAAATTCCC

MA0071.1_RORA_1/Jaspar

Match Rank:8
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-AGGAGGACAGTC
ATCAAGGTCA---

MA0105.3_NFKB1/Jaspar

Match Rank:9
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:AGGAGGACAGTC--
---GGGAAATTCCC

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-AGGAGGACAGTC
AAYTAGGTCA---