Information for 3-TCCTTTCCCTCC (Motif 4)


Reverse Opposite:

p-value:1e-11
log p-value:-2.550e+01
Information Content per bp:1.964
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif0.21%
Number of Background Sequences with motif7.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets150.4 +/- 88.4bp
Average Position of motif in Background184.1 +/- 136.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0471.1_E2F6/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TCCTTTCCCTCC-
--NCTTCCCGCCC

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TCCTTTCCCTCC-
-VDTTTCCCGCCA

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TCCTTTCCCTCC
--NYTTCCCGCC

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:4
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:TCCTTTCCCTCC--
----TTCCCGCCWG

MA0470.1_E2F4/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TCCTTTCCCTCC-
--NNTTCCCGCCC

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TCCTTTCCCTCC-
-ACTTTCACTTTC

MA0528.1_ZNF263/Jaspar

Match Rank:7
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------TCCTTTCCCTCC---
TCCTCCTCCCCCTCCTCCTCC

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TCCTTTCCCTCC
--DTTTCCCGCC

MA0469.1_E2F3/Jaspar

Match Rank:9
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TCCTTTCCCTCC-------
----CTCCCGCCCCCACTC

MA0508.1_PRDM1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TCCTTTCCCTCC--
TCACTTTCACTTTCN