Information for 24-GGCGCTGACT (Motif 40)


Reverse Opposite:

p-value:1e-1
log p-value:-3.207e+00
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.05%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets180.6 +/- 82.1bp
Average Position of motif in Background230.6 +/- 92.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)3.33
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.73
Offset:2
Orientation:forward strand
Alignment:GGCGCTGACT--
--TGCTGACTCA

MA0117.1_Mafb/Jaspar

Match Rank:2
Score:0.73
Offset:3
Orientation:forward strand
Alignment:GGCGCTGACT-
---GCTGACGC

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GGCGCTGACT--
--TGCTGAGTCA

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GGCGCTGACT-----
---GCTGASTCAGCA

PB0112.1_E2F2_2/Jaspar

Match Rank:5
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------GGCGCTGACT-
NNNNTTGGCGCCGANNN

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGCGCTGACT--
GGTGYTGACAGS

PB0041.1_Mafb_1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GGCGCTGACT----
AAATTTGCTGACTTAGA

PB0113.1_E2F3_2/Jaspar

Match Rank:8
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------GGCGCTGACT-
NNNNTTGGCGCCGANNN

MA0496.1_MAFK/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGCGCTGACT---
AAANTGCTGACTNAG

PB0042.1_Mafk_1/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GGCGCTGACT-
TAAAAATGCTGACTT