Information for 4-CTCCCGTGTGGG (Motif 7)


Reverse Opposite:

p-value:1e-9
log p-value:-2.194e+01
Information Content per bp:1.753
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets208.9 +/- 116.2bp
Average Position of motif in Background115.1 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)3.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:1
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CTCCCGTGTGGG----
----NGCGTGGGCGGR

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CTCCCGTGTGGG--
----TGCGTGGGYG

MA0472.1_EGR2/Jaspar

Match Rank:3
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CTCCCGTGTGGG------
---GTGCGTGGGCGGGNG

PB0114.1_Egr1_2/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTCCCGTGTGGG-----
-TGCGGAGTGGGACTGG

PB0103.1_Zic3_1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CTCCCGTGTGGG-
CCCCCCCGGGGGGGT

PB0101.1_Zic1_1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CTCCCGTGTGGG
CACCCCCGGGGGGG

PB0102.1_Zic2_1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTCCCGTGTGGG-
CCCCCCCGGGGGGGT

MA0147.2_Myc/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CTCCCGTGTGGG-
---CCATGTGCTT

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CTCCCGTGTGGG
----TGCGTG--

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CTCCCGTGTGGG-
---CCACGTGGNN