Information for 1-TTCCATTCGATG (Motif 1)


Reverse Opposite:

p-value:1e-21
log p-value:-4.976e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets213.6 +/- 111.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)2.25
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TTCCATTCGATG
ATTTTCCATT-----

MA0152.1_NFATC2/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TTCCATTCGATG
TTTTCCA-------

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TTCCATTCGATG-
ATTTGCATACAATGG

PB0028.1_Hbp1_1/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TTCCATTCGATG-
NNCATTCATTCATNNN

PB0033.1_Irf3_1/Jaspar

Match Rank:5
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TTCCATTCGATG
CAGTTTCGNTTCTN--

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TTCCATTCGATG-
-TNCCTTTGATGT

PB0098.1_Zfp410_1/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TTCCATTCGATG---
NNNTCCATCCCATAANN

PB0068.1_Sox1_1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TTCCATTCGATG---
AATCAATTCAATAATT

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TTCCATTCGATG----
ATTTCCTTTGATCTATA

PB0169.1_Sox15_2/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----TTCCATTCGATG
TNGAATTTCATTNAN--