Information for 6-GACGATTCCATT (Motif 2)


Reverse Opposite:

p-value:1e-21
log p-value:-4.976e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets408.0 +/- 162.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0468.1_DUX4/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GACGATTCCATT-
--TGATTAAATTA

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:2
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GACGATTCCATT
--ATTTTCCATT

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GACGATTCCATT-
-GGGATTGCATNN

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GACGATTCCATT
--GCATTCCAGN

PB0033.1_Irf3_1/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GACGATTCCATT---
-CAGTTTCGNTTCTN

PB0098.1_Zfp410_1/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GACGATTCCATT---
NNNTCCATCCCATAANN

MA0488.1_JUN/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GACGATTCCATT
AAGATGATGTCAT-

MA0081.1_SPIB/Jaspar

Match Rank:8
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GACGATTCCATT
-----TTCCTCT

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GACGATTCCATT
--RCATTCCWGG

PB0070.1_Sox30_1/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GACGATTCCATT-------
---ANNTCCATTGTTCNNN