Information for 3-ATTCGAGTCC (Motif 3)


Reverse Opposite:

p-value:1e-16
log p-value:-3.758e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif21.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets194.8 +/- 118.0bp
Average Position of motif in Background312.2 +/- 375.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ATTCGAGTCC-
GGTTAGAGACCT

PH0116.1_Nkx2-9/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ATTCGAGTCC------
NATTTAAGTACTTNAAA

PB0024.1_Gcm1_1/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----ATTCGAGTCC--
NNNNATGCGGGTNNNN

PB0203.1_Zfp691_2/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ATTCGAGTCC------
TACGAGACTCCTCTAAC

MA0158.1_HOXA5/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ATTCGAGTCC
AATTAGTG---

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ATTCGAGTCC
GCATTCCAGN--

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:ATTCGAGTCC-
---CTAGGCCT

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--ATTCGAGTCC
RCATTCCWGG--

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:ATTCGAGTCC-
-CTYRAGTGSY

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--ATTCGAGTCC
RCATTCCWGG--