Information for 4-CGATGATT (Motif 5)


Reverse Opposite:

p-value:1e-10
log p-value:-2.442e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif564.7
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets268.6 +/- 140.1bp
Average Position of motif in Background275.1 +/- 350.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)4.25
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CGATGATT-------
TNNNATGATTTCNNCNN

MA0038.1_Gfi1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CGATGATT--
CNGTGATTTN

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CGATGATT
-CATGAC-

PH0026.1_Duxbl/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CGATGATT------
NNNNGTTGATTGGGTCG

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CGATGATT-
GCAGTGATTT

PH0044.1_Homez/Jaspar

Match Rank:6
Score:0.63
Offset:-8
Orientation:reverse strand
Alignment:--------CGATGATT-
NNTAAAAACGATGTTNT

PH0017.1_Cux1_2/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CGATGATT----
TAATGATGATCACTA

MA0483.1_Gfi1b/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CGATGATT-
TGCTGTGATTT

MF0010.1_Homeobox_class/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CGATGATT
-AATAATT

MA0468.1_DUX4/Jaspar

Match Rank:10
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CGATGATT------
---TGATTAAATTA