| p-value: | 1e-10 |
| log p-value: | -2.386e+01 |
| Information Content per bp: | 1.970 |
| Number of Target Sequences with motif | 3.0 |
| Percentage of Target Sequences with motif | 75.00% |
| Number of Background Sequences with motif | 56.1 |
| Percentage of Background Sequences with motif | 0.02% |
| Average Position of motif in Targets | 183.3 +/- 109.9bp |
| Average Position of motif in Background | 253.5 +/- 319.1bp |
| Strand Bias (log2 ratio + to - strand density) | 1.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
| Match Rank: | 1 |
| Score: | 0.69
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | GGAATAATCCAT
TGAATTATGCAT |
|
|
|
PH0138.1_Pitx2/Jaspar
| Match Rank: | 2 |
| Score: | 0.66
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --GGAATAATCCAT---
GNNNATTAATCCCTNCN |
|
|
|
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer
| Match Rank: | 3 |
| Score: | 0.66
| | Offset: | 2
| | Orientation: | forward strand |
| Alignment: | GGAATAATCCAT
--NYTAATCCYB |
|
|
|
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer
| Match Rank: | 4 |
| Score: | 0.66
| | Offset: | 4
| | Orientation: | forward strand |
| Alignment: | GGAATAATCCAT
----TAATCCCN |
|
|
|
PH0130.1_Otx2/Jaspar
| Match Rank: | 5 |
| Score: | 0.66
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --GGAATAATCCAT---
GANNATTAATCCCTNNN |
|
|
|
PH0126.1_Obox6/Jaspar
| Match Rank: | 6 |
| Score: | 0.66
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | GGAATAATCCAT----
-CNATAATCCGNTTNT |
|
|
|
PB0185.1_Tcf1_2/Jaspar
| Match Rank: | 7 |
| Score: | 0.65
| | Offset: | 2
| | Orientation: | reverse strand |
| Alignment: | GGAATAATCCAT----
--NNTAATCCNGNCNN |
|
|
|
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer
| Match Rank: | 8 |
| Score: | 0.65
| | Offset: | 3
| | Orientation: | reverse strand |
| Alignment: | GGAATAATCCAT
---YTAATCCY- |
|
|
|
PH0129.1_Otx1/Jaspar
| Match Rank: | 9 |
| Score: | 0.65
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --GGAATAATCCAT---
NNNAATTAATCCCCNCN |
|
|
|
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer
| Match Rank: | 10 |
| Score: | 0.64
| | Offset: | 2
| | Orientation: | forward strand |
| Alignment: | GGAATAATCCAT
--GCTAATCC-- |
|
|
|
