Information for 20-TTTTTCCGTTTG (Motif 7)


Reverse Opposite:

p-value:1e-7
log p-value:-1.628e+01
Information Content per bp:1.930
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif30.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets249.5 +/- 14.5bp
Average Position of motif in Background376.4 +/- 352.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TTTTTCCGTTTG
ATTTTCCATT--

MA0152.1_NFATC2/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TTTTTCCGTTTG
-TTTTCCA----

MA0028.1_ELK1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TTTTTCCGTTTG
--CTTCCGGNNN

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TTTTTCCGTTTG
--TGTCGGTT--

PB0012.1_Elf3_1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTTTTCCGTTTG
TTACTTCCTNGTN

MF0001.1_ETS_class/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TTTTTCCGTTTG
--CTTCCGGT--

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TTTTTCCGTTTG
NRYTTCCGGY--

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTTTTCCGTTTG
NRYTTCCGGH--

MA0136.1_ELF5/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTTTTCCGTTTG
TACTTCCTT---

PB0033.1_Irf3_1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTTTTCCGTTTG-
CAGTTTCGNTTCTN