Information for 1-AGCCTCGG (Motif 10)


Reverse Opposite:

p-value:1e-8
log p-value:-1.997e+01
Information Content per bp:1.937
Number of Target Sequences with motif221.0
Percentage of Target Sequences with motif38.91%
Number of Background Sequences with motif13364.2
Percentage of Background Sequences with motif27.44%
Average Position of motif in Targets218.2 +/- 117.6bp
Average Position of motif in Background214.0 +/- 126.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AGCCTCGG-----
NTNGCCTCAGGCNNN

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGCCTCGG
CAGCC----

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGCCTCGG-----
-SCCTSAGGSCAW

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGCCTCGG
AGGCCTAG-

MA0003.2_TFAP2A/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGCCTCGG----
CATTGCCTCAGGGCA

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGCCTCGG-----
-GCCTCAGGGCAT

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGCCTCGG
BCAGACWA--

MA0146.2_Zfx/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGCCTCGG----
CAGGCCNNGGCCNN

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGCCTCGG-----
NTCGCCTCAGGCAAT

MA0524.1_TFAP2C/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGCCTCGG------
TGCCCTGGGGCNANN