Information for 2-ACGGTGAA (Motif 12)


Reverse Opposite:

p-value:1e-8
log p-value:-1.904e+01
Information Content per bp:1.906
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif8.98%
Number of Background Sequences with motif1768.7
Percentage of Background Sequences with motif3.63%
Average Position of motif in Targets211.8 +/- 130.8bp
Average Position of motif in Background214.7 +/- 130.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0056.1_MZF1_1-4/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ACGGTGAA
-TGGGGA-

PB0046.1_Mybl1_1/Jaspar

Match Rank:2
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------ACGGTGAA---
NNANTAACGGTTNNNAN

PB0045.1_Myb_1/Jaspar

Match Rank:3
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------ACGGTGAA---
NNNNTAACGGTTNNNAN

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ACGGTGAA---
GAAAGTGAAAGT

PB0138.1_Irf4_2/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ACGGTGAA----
GNNACCGAGAATNNN

MA0117.1_Mafb/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ACGGTGAA--
--GCTGACGC

MA0057.1_MZF1_5-13/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ACGGTGAA
GGAGGGGGAA

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ACGGTGAA---
CAGGTAAGTAT

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--ACGGTGAA
TCAAGGTCAN

POL002.1_INR/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-ACGGTGAA
NNNANTGA-