Information for 7-GGCGGGCA (Motif 19)


Reverse Opposite:

p-value:1e-5
log p-value:-1.339e+01
Information Content per bp:1.700
Number of Target Sequences with motif220.0
Percentage of Target Sequences with motif38.73%
Number of Background Sequences with motif14364.7
Percentage of Background Sequences with motif29.49%
Average Position of motif in Targets231.3 +/- 115.6bp
Average Position of motif in Background213.9 +/- 127.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.59
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:1
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--GGCGGGCA
CWGGCGGGAA

MA0470.1_E2F4/Jaspar

Match Rank:2
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-GGCGGGCA--
GGGCGGGAAGG

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:3
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-GGCGGGCA---
TGGCGGGAAAHB

MA0471.1_E2F6/Jaspar

Match Rank:4
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-GGCGGGCA--
GGGCGGGAAGG

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.78
Offset:0
Orientation:forward strand
Alignment:GGCGGGCA--
GGCGGGAARN

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.78
Offset:0
Orientation:forward strand
Alignment:GGCGGGCA--
GGCGGGAAAH

MA0469.1_E2F3/Jaspar

Match Rank:7
Score:0.74
Offset:-7
Orientation:reverse strand
Alignment:-------GGCGGGCA
NNGTGNGGGCGGGAG

MA0024.2_E2F1/Jaspar

Match Rank:8
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GGCGGGCA-
CGGGCGGGAGG

PB0164.1_Smad3_2/Jaspar

Match Rank:9
Score:0.72
Offset:-6
Orientation:reverse strand
Alignment:------GGCGGGCA---
NAGANTGGCGGGGNGNA

MA0597.1_THAP1/Jaspar

Match Rank:10
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GGCGGGCA-
TNNGGGCAG