Information for 17-TATATATACAYR (Motif 21)


Reverse Opposite:

p-value:1e-5
log p-value:-1.189e+01
Information Content per bp:1.798
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif5.46%
Number of Background Sequences with motif1084.9
Percentage of Background Sequences with motif2.23%
Average Position of motif in Targets246.0 +/- 87.4bp
Average Position of motif in Background203.1 +/- 152.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)2.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0163.1_Six6_2/Jaspar

Match Rank:1
Score:0.82
Offset:-4
Orientation:forward strand
Alignment:----TATATATACAYR-
ATGGGATATATCCGCCT

PB0198.1_Zfp128_2/Jaspar

Match Rank:2
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--TATATATACAYR
NNTATANATATACN

PB0080.1_Tbp_1/Jaspar

Match Rank:3
Score:0.79
Offset:-4
Orientation:forward strand
Alignment:----TATATATACAYR
TCTTTATATATAAATA

MA0033.1_FOXL1/Jaspar

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TATATATACAYR
TATGTNTA----

POL012.1_TATA-Box/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TATATATACAYR--
GTATAAAAGGCGGGG

MA0108.2_TBP/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TATATATACAYR--
GTATAAAAGGCGGGG

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TATATATACAYR
-GHATATKCAT-

MA0042.1_FOXI1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TATATATACAYR-
-AAACAAACANNC

MF0005.1_Forkhead_class/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TATATATACAYR
-AAATAAACA--

PB0015.1_Foxa2_1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TATATATACAYR--
NNNTTTGTTTACTTTTN