Information for 17-CCCTAACC (Motif 24)


Reverse Opposite:

p-value:1e-3
log p-value:-7.578e+00
Information Content per bp:1.530
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.46%
Number of Background Sequences with motif418.2
Percentage of Background Sequences with motif0.86%
Average Position of motif in Targets228.3 +/- 105.8bp
Average Position of motif in Background215.1 +/- 122.3bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)4.43
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CCCTAACC
AGGTCTCTAACC

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CCCTAACC--
NNACTTACCTN

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCCTAACC-
TGACCTTGACCT

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCCTAACC-
-GCTAATCC

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCCTAACC
CCCCCCCC

PB0185.1_Tcf1_2/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCCTAACC-------
-NNTAATCCNGNCNN

MA0057.1_MZF1_5-13/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CCCTAACC
TTCCCCCTAC--

MA0155.1_INSM1/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CCCTAACC
CGCCCCCTGACA

PB0128.1_Gcm1_2/Jaspar

Match Rank:9
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------CCCTAACC---
NTCNTCCCCTATNNGNN

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCCTAACC--
--YTAATCCY