Information for 5-TCATCGAATGGA (Motif 6)


Reverse Opposite:

p-value:1e-11
log p-value:-2.707e+01
Information Content per bp:1.906
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets243.8 +/- 96.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)2.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0005.1_Bbx_1/Jaspar

Match Rank:1
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TCATCGAATGGA
NANTTCATTGAATTA-

PB0028.1_Hbp1_1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TCATCGAATGGA----
ACTATGAATGAATGAT

PB0068.1_Sox1_1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TCATCGAATGGA--
NNNTATTGAATTGNNN

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCATCGAATGGA
GTCATN-------

PB0098.1_Zfp410_1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TCATCGAATGGA---
TATTATGGGATGGATAA

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TCATCGAATGGA---
CCATTGTATGCAAAT

PB0006.1_Bcl6b_1/Jaspar

Match Rank:7
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TCATCGAATGGA
NNNATTCCTCGAAAGN-

MA0463.1_Bcl6/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TCATCGAATGGA
TTTCCTAGAAAGCA

PH0014.1_Cphx/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TCATCGAATGGA-
ATGATCGAATCAAA

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TCATCGAATGGA
-NCTGGAATGC-