Information for 9-TACGTGGAGC (Motif 10)


Reverse Opposite:

p-value:1e-2
log p-value:-6.764e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.76%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets420.0 +/- 0.0bp
Average Position of motif in Background248.4 +/- 98.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0130.1_ZNF354C/Jaspar

Match Rank:1
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:TACGTGGAGC
---GTGGAT-

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:2
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TACGTGGAGC
GGGTACGTGC---

MA0259.1_HIF1A::ARNT/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TACGTGGAGC
GGACGTGC---

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TACGTGGAGC
RTACGTGC---

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TACGTGGAGC
TACGTGCV--

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:TACGTGGAGC
----CGGAGC

MA0104.3_Mycn/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TACGTGGAGC
CACGTGGC--

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TACGTGGAGC
NNCCACGTGG---

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TACGTGGAGC
CACGTGGN--

MA0004.1_Arnt/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TACGTGGAGC
CACGTG----