Information for 10-CGGACCAGGT (Motif 11)


Reverse Opposite:

p-value:1e-2
log p-value:-6.764e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.76%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets263.0 +/- 0.0bp
Average Position of motif in Background308.2 +/- 110.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0200.1_Zfp187_2/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CGGACCAGGT---
NNAGGGACAAGGGCNC

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CGGACCAGGT---
---NNCAGGTGNN

MA0103.2_ZEB1/Jaspar

Match Rank:3
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:CGGACCAGGT----
-----CAGGTGAGG

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CGGACCAGGT-
---ACCACGTG

MA0059.1_MYC::MAX/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CGGACCAGGT----
---ACCACGTGCTC

PB0043.1_Max_1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CGGACCAGGT-------
-TGACCACGTGGTCGGG

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CGGACCAGGT-------
ATCCACAGGTGCGAAAA

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CGGACCAGGT
CGGAGC----

PB0047.1_Myf6_1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CGGACCAGGT-----
GAAGAACAGGTGTCCG

MA0104.3_Mycn/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CGGACCAGGT-
---GCCACGTG