Information for 12-GGCGCAATAT (Motif 13)


Reverse Opposite:

p-value:1e-2
log p-value:-6.764e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.76%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets445.0 +/- 0.0bp
Average Position of motif in Background325.3 +/- 166.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0002.1_Arid5a_1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGCGCAATAT---
NNTNNCAATATTAG

MA0466.1_CEBPB/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GGCGCAATAT
ATTGTGCAATA-

PB0112.1_E2F2_2/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GGCGCAATAT--
CCTTCGGCGCCAAAAGG

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGCGCAATAT
GTTGCGCAAT--

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGCGCAATAT
GGCGGGAAAH

PB0113.1_E2F3_2/Jaspar

Match Rank:6
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GGCGCAATAT--
AGCTCGGCGCCAAAAGC

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGCGCAATAT-
AGATGCAATCCC

YY1(Zf)/Promoter/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGCGCAATAT--
GCCGCCATCTTG

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGCGCAATAT
TTATGCAAT--

POL006.1_BREu/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGCGCAATAT
GGCGCGCT--