Information for 13-TATCCGTGAA (Motif 14)


Reverse Opposite:

p-value:1e-2
log p-value:-6.764e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.76%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.0 +/- 0.0bp
Average Position of motif in Background250.3 +/- 135.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0075.1_Sp100_1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TATCCGTGAA--
ATTTTCCGNNAAAT

PB0138.1_Irf4_2/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TATCCGTGAA----
GNNACCGAGAATNNN

MA0069.1_Pax6/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TATCCGTGAA
AANTCATGCGTGAA

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TATCCGTGAA
AAGATATCCTT---

MA0137.3_STAT1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TATCCGTGAA-
TTTCCTGGAAA

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TATCCGTGAA--
NATTTCCNGGAAAT

PB0046.1_Mybl1_1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TATCCGTGAA---
TTGAAAACCGTTAATTT

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TATCCGTGAA-
NTTTCCNGGAAA

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TATCCGTGAA
CTTCCNGGAA

MA0067.1_Pax2/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TATCCGTGAA-
---NCGTGACN