Information for 1-TCTYTCTC (Motif 16)


Reverse Opposite:

p-value:1e-2
log p-value:-6.743e+00
Information Content per bp:1.697
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif61.90%
Number of Background Sequences with motif10157.8
Percentage of Background Sequences with motif27.93%
Average Position of motif in Targets354.2 +/- 136.4bp
Average Position of motif in Background246.8 +/- 173.7bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.46
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0139.1_Irf5_2/Jaspar

Match Rank:1
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----TCTYTCTC--
NNAATTCTCGNTNAN

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TCTYTCTC--
ACCACTCTCGGTCAC

PB0138.1_Irf4_2/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TCTYTCTC--
AGTATTCTCGGTTGC

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TCTYTCTC--
TGTCTGDCACCT

MA0513.1_SMAD2::SMAD3::SMAD4/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TCTYTCTC--
CTGTCTGTCACCT

PB0126.1_Gata5_2/Jaspar

Match Rank:6
Score:0.58
Offset:-9
Orientation:reverse strand
Alignment:---------TCTYTCTC
NNNCTGATATCTCNNNN

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TCTYTCTC--
YCTTTGTTCC

PB0166.1_Sox12_2/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TCTYTCTC-----
ANTCCTTTGTCTNNNN

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TCTYTCTC----
ACTTTCACTTTC

MA0442.1_SOX10/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TCTYTCTC
-CTTTGT-