| p-value: | 1e-5 |
| log p-value: | -1.345e+01 |
| Information Content per bp: | 1.884 |
| Number of Target Sequences with motif | 9.0 |
| Percentage of Target Sequences with motif | 42.86% |
| Number of Background Sequences with motif | 2167.9 |
| Percentage of Background Sequences with motif | 5.96% |
| Average Position of motif in Targets | 317.1 +/- 137.5bp |
| Average Position of motif in Background | 250.8 +/- 251.7bp |
| Strand Bias (log2 ratio + to - strand density) | 0.7 |
| Multiplicity (# of sites on avg that occur together) | 1.57 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
PH0148.1_Pou3f3/Jaspar
| Match Rank: | 1 |
| Score: | 0.72
| | Offset: | -5
| | Orientation: | reverse strand |
| Alignment: | -----YATGCATGCA--
TNNATTATGCATANNTT |
|
|
|
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
| Match Rank: | 2 |
| Score: | 0.70
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---YATGCATGCA
GHATATKCAT--- |
|
|
|
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer
| Match Rank: | 3 |
| Score: | 0.70
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -YATGCATGCA----
ATTTGCATACAATGG |
|
|
|
PB0170.1_Sox17_2/Jaspar
| Match Rank: | 4 |
| Score: | 0.68
| | Offset: | -5
| | Orientation: | forward strand |
| Alignment: | -----YATGCATGCA--
GACCACATTCATACAAT |
|
|
|
PB0028.1_Hbp1_1/Jaspar
| Match Rank: | 5 |
| Score: | 0.67
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --YATGCATGCA----
NNCATTCATTCATNNN |
|
|
|
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer
| Match Rank: | 6 |
| Score: | 0.61
| | Offset: | 1
| | Orientation: | forward strand |
| Alignment: | YATGCATGCA-
-TBGCACGCAA |
|
|
|
PH0145.1_Pou2f3/Jaspar
| Match Rank: | 7 |
| Score: | 0.61
| | Offset: | -5
| | Orientation: | reverse strand |
| Alignment: | -----YATGCATGCA-
TNTAATTTGCATACNA |
|
|
|
PB0178.1_Sox8_2/Jaspar
| Match Rank: | 8 |
| Score: | 0.61
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -YATGCATGCA---
ACATTCATGACACG |
|
|
|
MA0507.1_POU2F2/Jaspar
| Match Rank: | 9 |
| Score: | 0.60
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----YATGCATGCA
TTCATTTGCATAT- |
|
|
|
PH0144.1_Pou2f2/Jaspar
| Match Rank: | 10 |
| Score: | 0.59
| | Offset: | -5
| | Orientation: | reverse strand |
| Alignment: | -----YATGCATGCA-
TNTAATTTGCATANNN |
|
|
|
