Information for 3-GTGGGTGGATGG (Motif 3)


Reverse Opposite:

p-value:1e-5
log p-value:-1.212e+01
Information Content per bp:1.785
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif28.57%
Number of Background Sequences with motif823.3
Percentage of Background Sequences with motif2.26%
Average Position of motif in Targets183.2 +/- 98.1bp
Average Position of motif in Background263.3 +/- 277.3bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)2.60
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0472.1_EGR2/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GTGGGTGGATGG---
GTGCGTGGGCGGGNG

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GTGGGTGGATGG
-TGCGTGGGYG-

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GTGGGTGGATGG---
---CGTGGGTGGTCC

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GTGGGTGGATGG-
-NGCGTGGGCGGR

MA0073.1_RREB1/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GTGGGTGGATGG---
NGGGGGGGGGTGGTTTGGGG

PB0010.1_Egr1_1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GTGGGTGGATGG-
ANTGCGGGGGCGGN

PB0097.1_Zfp281_1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTGGGTGGATGG---
GGGGGGGGGGGGGGA

MA0130.1_ZNF354C/Jaspar

Match Rank:8
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GTGGGTGGATGG
----GTGGAT--

PB0167.1_Sox13_2/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GTGGGTGGATGG------
-GTATTGGGTGGGTAATT

MA0162.2_EGR1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTGGGTGGATGG---
-GGCGGGGGCGGGGG