Information for 2-GCTCATACGC (Motif 5)


Reverse Opposite:

p-value:1e-4
log p-value:-9.921e+00
Information Content per bp:1.926
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif123.5
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets257.3 +/- 168.7bp
Average Position of motif in Background251.5 +/- 263.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF(NRF)/Promoter/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GCTCATACGC--
GCGCATGCGCAC

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCTCATACGC--
GCGCATGCGCAG

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GCTCATACGC--
AGCGGCACACACGCAA

MA0506.1_NRF1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCTCATACGC
TGCGCAGGCGC

PB0143.1_Klf7_2/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCTCATACGC-------
AAGCATACGCCCAACTT

MA0111.1_Spz1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCTCATACGC-
GCTGTTACCCT

PB0026.1_Gm397_1/Jaspar

Match Rank:7
Score:0.56
Offset:-7
Orientation:forward strand
Alignment:-------GCTCATACGC
CAGATGTGCACATACGT

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:8
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GCTCATACGC-
-----CACGCA

POL002.1_INR/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GCTCATACGC
--TCAGTCTT

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GCTCATACGC-
-CRCCCACGCA