Information for 7-CGCTTGGCGT (Motif 8)


Reverse Opposite:

p-value:1e-3
log p-value:-7.457e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.76%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets104.0 +/- 0.0bp
Average Position of motif in Background135.6 +/- 87.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0161.1_NFIC/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CGCTTGGCGT
---TTGGCA-

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CGCTTGGCGT------
NNNNTTGGCGCCGANNN

PB0112.1_E2F2_2/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CGCTTGGCGT------
NNNNTTGGCGCCGANNN

PB0147.1_Max_2/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CGCTTGGCGT
NNGTCGCGTGNCAC

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CGCTTGGCGT
----TGACGT

PB0029.1_Hic1_1/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CGCTTGGCGT---
NGTAGGTTGGCATNNN

NFY(CCAAT)/Promoter/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CGCTTGGCGT
CCGATTGGCT-

PB0032.1_IRC900814_1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CGCTTGGCGT----
GNNATTTGTCGTAANN

MA0018.2_CREB1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CGCTTGGCGT--
----TGACGTCA

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CGCTTGGCGT
TGCGTG----