Information for 13-CATTCTCC (Motif 14)


Reverse Opposite:

p-value:1e-6
log p-value:-1.532e+01
Information Content per bp:1.937
Number of Target Sequences with motif121.0
Percentage of Target Sequences with motif19.27%
Number of Background Sequences with motif5939.5
Percentage of Background Sequences with motif12.15%
Average Position of motif in Targets216.7 +/- 112.9bp
Average Position of motif in Background213.8 +/- 126.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------CATTCTCC
NNGCACCTTTCTCC

PB0138.1_Irf4_2/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CATTCTCC-----
AGTATTCTCGGTTGC

MA0078.1_Sox17/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CATTCTCC
CTCATTGTC-

PB0139.1_Irf5_2/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CATTCTCC-----
NNAATTCTCGNTNAN

MA0515.1_Sox6/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CATTCTCC-
CCATTGTTTT

POL002.1_INR/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CATTCTCC
TCAGTCTT-

MA0090.1_TEAD1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CATTCTCC--
CACATTCCTCCG

MA0442.1_SOX10/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CATTCTCC
CTTTGT--

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CATTCTCC-
CCWTTGTYYB

MA0152.1_NFATC2/Jaspar

Match Rank:10
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CATTCTCC-
--TTTTCCA