Information for 14-GGGCGCCT (Motif 15)


Reverse Opposite:

p-value:1e-6
log p-value:-1.405e+01
Information Content per bp:1.943
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif7.01%
Number of Background Sequences with motif1518.2
Percentage of Background Sequences with motif3.11%
Average Position of motif in Targets203.5 +/- 129.2bp
Average Position of motif in Background213.1 +/- 124.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0008.1_E2F2_1/Jaspar

Match Rank:1
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---GGGCGCCT----
NTCGCGCGCCTTNNN

PB0052.1_Plagl1_1/Jaspar

Match Rank:2
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----GGGCGCCT----
TTGGGGGCGCCCCTAG

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GGGCGCCT
AGCGCGCC-

PB0009.1_E2F3_1/Jaspar

Match Rank:4
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---GGGCGCCT----
ANCGCGCGCCCTTNN

PB0113.1_E2F3_2/Jaspar

Match Rank:5
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GGGCGCCT-----
AGCTCGGCGCCAAAAGC

PB0143.1_Klf7_2/Jaspar

Match Rank:6
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----GGGCGCCT----
NNNTNGGGCGTATNNTN

PB0112.1_E2F2_2/Jaspar

Match Rank:7
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----GGGCGCCT----
NNNNTTGGCGCCGANNN

PB0151.1_Myf6_2/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGGCGCCT------
GGNGCGNCTGTTNNN

PB0095.1_Zfp161_1/Jaspar

Match Rank:9
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GGGCGCCT--
NCANGCGCGCGCGCCA

PB0133.1_Hic1_2/Jaspar

Match Rank:10
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GGGCGCCT--
NNNNTTGGGCACNNCN