Information for 19-TAYATATV (Motif 19)


Reverse Opposite:

p-value:1e-2
log p-value:-5.689e+00
Information Content per bp:1.599
Number of Target Sequences with motif86.0
Percentage of Target Sequences with motif13.69%
Number of Background Sequences with motif4992.6
Percentage of Background Sequences with motif10.22%
Average Position of motif in Targets228.1 +/- 124.9bp
Average Position of motif in Background214.4 +/- 138.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.74
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0163.1_Six6_2/Jaspar

Match Rank:1
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----TAYATATV----
ANNNGGATATATCCNNN

MA0033.1_FOXL1/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TAYATATV
TATGTNTA

PB0198.1_Zfp128_2/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----TAYATATV--
TGTATATATATACC

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TAYATATV-
ATGMATATDC

POL012.1_TATA-Box/Jaspar

Match Rank:5
Score:0.63
Offset:-8
Orientation:reverse strand
Alignment:--------TAYATATV
NNNNNNCTTTTATAN-

PB0080.1_Tbp_1/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TAYATATV----
TCTTTATATATAAATA

MA0108.2_TBP/Jaspar

Match Rank:7
Score:0.63
Offset:-8
Orientation:reverse strand
Alignment:--------TAYATATV
NNNNNNCTTTTATAN-

MA0025.1_NFIL3/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TAYATATV
ANGTTACATAA-

PH0084.1_Irx3_2/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TAYATATV-----
AATATACATGTAATATA

MA0124.1_NKX3-1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TAYATATV
TAAGTAT-