Information for 22-CAAAAAGCCGCG (Motif 22)


Reverse Opposite:

p-value:1e-1
log p-value:-4.361e+00
Information Content per bp:1.892
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.16%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets210.5 +/- 153.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)4.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CAAAAAGCCGCG--
AGCAACAGCCGCACC

PB0009.1_E2F3_1/Jaspar

Match Rank:2
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CAAAAAGCCGCG----
-ATAAGGGCGCGCGAT

PB0008.1_E2F2_1/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CAAAAAGCCGCG----
-ATAAAGGCGCGCGAT

MA0442.1_SOX10/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CAAAAAGCCGCG
-ACAAAG-----

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CAAAAAGCCGCG
----CAGCC---

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:6
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CAAAAAGCCGCG
--AACAGCTG--

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CAAAAAGCCGCG
VRRACAAWGG----

MA0042.1_FOXI1/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CAAAAAGCCGCG
AAACAAACANNC---

PB0137.1_Irf3_2/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CAAAAAGCCGCG-
GGAGAAAGGTGCGA

MA0521.1_Tcf12/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CAAAAAGCCGCG-
--AACAGCTGCAG